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Pathogenic Bacteria

Includes the following: Pathogenic Bacteria Lecture Questions: Host-Parasite Interactions  Questions may be submitted online to the "contact us" section of this website or sent directly to: DigiCare Hearing Research & Rehabilitation, P.O. Box 706, Rye, CO 81069, or faxed to (719) 676-6882. Your name, address, and telephone number along with your request are required in order to receive a reply from the Digicare team.


Pathogenic Bacteria Lecture Questions
Host-Parasite Interactions

1. What stages occur during the pathogenesis of a microbial infection? Why is it important to understand the mechanisms involved at each stage of infection by any specific microbe?

In order for a pathogen to establish an infection, it must first gain access to the host through contact and entry. It then establishes itself (colonization). Once a colony is developing, the infection spreads to other parts of the body. If the organism is able to survive, it may begin to cause damage (pathology) to the host.

To fight pathogenic organisms effectively, we must understand each step of the development of pathology if we want to block the orderly progression of an infection.

2. What are the normal flora in each region of the body? What factors modify the numbers and kinds of microbes in the normal flora?

Site Normal Flora
Blood none
Tissue none
Skin staphylococci, propionibacterium
Mouth streptococci, neisseria, moraxella
Nasopharynx Staph aureus and those of mouth
Esophagus transient mouth flora
Stomach few (if any)
Small intestine scanty, variable
Large intestine Bifidobacterium, lactobacillus, strep
Vagina skin / colon flora

Several factors can modify the "normal"flora of any organ system. The amount and type of nutrients available, pH, redox potentials, local acting anti microbials (bile, lysozyme, etc), and competition for nutrients among bacteria all contribute to the selection of the "normal" flora. As the host’s condition changes with illness, pregnancy, age, or geographic location, the "normal" flora will change. Some bacteria that are "normal" in one site can cause disease in another. (ex: E. coli in urinary tract-->infection)

3. For each model of microbial pathogenesis discussed in lecture, what kind of virulence factors are important?

Virulence factors inherent to bacteria (whether found on the chromosome, plasmid or in a bacteriophage) allow the bacteria to survive in conditions that kill other bacteria. The expression of these virulence factors is tightly regulated in response to environmental stimuli. Bacteria can mimic external signals that stimulate host cells, secrete toxins that damage host cells, block the release of neuromuscular signals, or inhibit host protein synthesis.

4. For each model of microbial pathogenesis discussed in lecture, what kind of microbial defenses are important for the host?

The host defense against bacteria is a broad system. Nonspecific and mechanical barriers such as the external epithelial layer, flushing action of secretions, and a hostile surface environment (lo pH, enzymes, etc) are the first line of defense against pathogens. The immune response mounted against pathogens that penetrate the host is the second line of defense. People who cannot mount a well rounded immune response are at much higher risk of developing life threatening infections.

Bacterial Toxins

1. How would you investigate whether a newly discovered pathogenic bacterium that causes pneumonia produces a toxin that is essential for pathogenesis?

By using the molecular version of Koch’s postulates, one could investigate the pathogenesis of a specific toxin by the following sequence:

1. Clone the gene for the suspected toxin

2. Inactivate the cloned gene in vitro by genetic engineering

3. Replace the wild type allele in the pathogenic microbe with the inactivated allele

4. See if the loss of the suspected toxin results in loss of pathogenesis


2. What are A-B type toxins? What are the functions of the two domains or subunits of such toxins?

Toxins that must cross the plasma membrane of host cells to reach an intracellular target are identified as A-B type toxins. They are bifunctional proteins with separate domains. The A domain is the "active" domain and the B domain is the "binding" domain. The toxins use normal membrane receptors as points of entry into the cell and susceptibility is determined by the presence or absence of the particular receptor on a specific cell. Most toxis bind their receptor and are then transported, by endocytosis, into the cytoplasm where they become active and attack their target.

3. What features are shared by ADP-ribosylating toxins? What features are unique for each toxin? What are some possible reasons that many toxins have ADP-ribosylating activity?

All of the ADP-ribosylating toxins catalyze the transfer of ADP-ribose from NAD to acceptor proteins. the NAD binding domain is highly cconserved among these toxins. But, they recognize different acceptor proteins and interact with target cells via defferent cell durface receptors. One could postulate that the reason many toxins use this mechanism is its effectiveness in rendering the host defenseless and lead to the death of the host cell. One could also postulate that the genetic information for this toxin has been passed from species to species over a long period of time and that each bacteria has modified the toxin to fit its particular needs.

4. How would you test for immunity to diptheria? To tetanus?

One could inject a previously immunized person (either one who has had an infection or one who has been immunized) with a small amount of the toxoid from the two diseases and see if an immune response develops. By measuring the antibody titer to the disease, one could quantitatively assess host immunity.

Enteric Bacteria

1. What is the purpose of culturing diarrheic stools onto media containing lactose?

This would allow one to discern the types of bacteria growing in a patients GI tract. Salmonella, Shigella, and Yersinia are all nonfermenters of lactose. MacConkey agar contains bile salts, lactose, dyes, nutrients and a pH sensitive indicator. Bacteria that can ferment lactose will produce acid, and cause the pH indicator to become hot pink. Bacteria that are unable to ferment lactose (Salmonella, Shigella, and Yersinia) will appear as clear or colorless on the plate.

2. What is meant by endotoxin? Describe the effects of such a molecule.

Endotoxin is the lipid A portion of LPS that causes endotoxic shock upon release in the host circulation. This presents as fever, intravascular coagulation, hypotension, complement activation, and B cell stimulation.

3. How are the enterobacteriacea serotyped? For what purpose is this done?

The enterobacteriacea are serotyped by agglutination with antisera to three different surface antigens (O, H and K/Vi). The differences seen on serotyping allow one to identify the bacterial species.

4. Compare the pathogenesis of Shigella sp. versus Salmonella typhi. How does each pathogen interact with macrophages? How does S. typhi disseminate thru the body? What is the basis for the colonic ulcers that occur during Shigella infection?

Shigella species passes thru the stomach and small intestine, when it reaches the colon it interacts with the M cell, an antigen presenting cell of Peyer’s patches. It causes death of macrophages in the lamina propria by inducing apoptosis. It is rarely disseminated into the bloodstream. The bacterial invasion of the colon results in acute inflammation and necrosis. This leads to the formation of abcesses and ulcers.

S. typhi enters M cells by endocytosis and eventually macrophages in the submucosal layer. These infected macrophages escape the colonic structure and eventually seed the bloodstream. Infections usually spread systemically and come to a focus in the liver and spleen.

5. Compare the reservoirs, infectious dose, and risk groups for Shigella, Salmonella typhi, Salmonella enteriditis, and Y. enterocolotica. Where in the world are S. flexnerii, S. sonnei, and S. typhi isolated?

Bacteria Reservoir Infectious dose Hi risk group Location
Shigella humans 200 institutions or crowding worlwide
S. sonnei humans 200 children US / 1st world
S. flexnerii humans 200 institutions or crowding American Indians / 3rd world
Sal. typhi humans 106 children / elderly 3rd world
Sal. enteriditis animals 104 picnics worldwide
Y. enterocolitica animals >109 people who eat undercooked meat Europe / Scandinavia

6. How might one prevent transmission of S. typhi, Shigella and S. enterocolitica? For which of these pathogens is there a vaccine?

All of these diseases can be prevented by practicing improved sanitation and hygiene. Basic preventive medicine measures can prevent these illnesses (hand washing, latrines away from food prep sites, pest control, etc). There is a vaccine against S. typhi.

7. Which of the enterobacteriaceae can cause mesenteric lymphadenitis?

Yersinia sp. causes mesenteric lymphadenitis.


Enterics II

1. What are the different ways that E. Coli can cause diarrhea and enteritis? Which bacteria use which mechanism?

E. coli can cause diarrhea via several mechanisms. ETEC produces heat labile and heat stable toxins that affect the small bowel, producing a watery diarrhea without blood. EIEC causes diarrhea identical to a Shigella infection, bloody and loaded with neutrophils. EPEC causes the "attaching and effacement" lesions that lead to a watery diarrhea. EHEC causes bloody diarrhea without WBCs in the stool.

2. What is the mechanism of heat labile toxin (LT), stable toxin (ST), and Shiga toxin?

LT activates adenylate cyclase and cAMP in the intestinal cell (this is identical to the action of cholera toxin).

ST activates guanylate cyclase and cGMP in the intestinal cell.

Shiga toxin is cytotoxic and enterotoxic. It inhibits eukaryotic protein synthesis and has neurotoxic effects as well.

3. Why are US travelers generally susceptible to ETEC infection but not to EPEC infection?

EPEC infects susceptible people of all ages who are exposed to the pathogen. EPEC only infects small children, possibly due to selection of specific host characteristics by the pathogen that are present in infants, but not present in adults.

4. What is the natural habitat of Vibrio and Campylobacter species? What are some common sources of infection with these pathogens?

Vibrio is abundant in marine and surface waters. Drinking water that is infested with the pathogen or eating aquatic life from infested waters causes disease in humans.

Campylobacter is a normal GI commensal of many animals. Consumption of water that is infested with the pathogen or eating animals contaminated with the pathogen causes disease in humans.

5. Describe the spectrum of disease caused by Vibrio Cholerae. Name two virulence factors utilized by this pathogen and describe the physiological basis behind the intestinal secretion caused by this organism.

Cholera can range from an asymptomatic "carrier" state to full blown "cholera gravis" that is life threatening due to the massive loss of fluid. The bacteria use a specific pillus (Tcp) to attach to the brush border of epithelial cells. The bacteria then produce the cholera toxin that activates adenylate cyclase and increases the intracellular cAMP level. This leads to increased secretion of Cl-, K+ and HCO3- from cells and decreased NaCl coupled absorption. The outward flow of ions from the intestinal cells leads to an osmotic loss of water.

6. Where is cholera endemic? Who is at risk? What vaccines are available?

Cholera is endemic to Indian, southern Asia, Africa, Indonesia, South / Central America and the southern U.S. coastline. Children in endemic areas are at greatest risk of developing the disease. There is a parenteral whole cell killed vaccine available that has some drawbacks.

7. What is the first and formost important form of treatment for a cholera patient?

Oral or IV fluid and electrolyte replacement is the most important treatment of cholera.

8. Describe the type of stools that can result from infection with Campylobacter jejuni. What are the special conditions needed to culture this organism?

Stools from an infected person resemble those of a person with Shigella. They can be bloody and contain neutrophils. This organism must be cultured in CO2 and ¯ O2.

Enteric Bacteria III

1. Describe the pathogenesis of H. Pylori, including the host response to infection. What are some of the major virulence factors used by this pathogen?

H. pylori is ingested and passes into the stomach. It penetrates the gastric mucosa and colonizes the stomach’s epithelium. Damage to the epithelium leads to superficial inflammation and is followed by deep inflammation. The bacteria excrete urease that allows the bacteria to survive in the low pH of the stomach. The bacterial flagella may assist in the penetration of the mucosa and a vacuolating cytotoxin may assist in damaging cells.

2. Compare the epidemiology of H. Pylori infection among people of the 1st and 3rd worlds. How is the infection transmitted?

H. Pylori is found in the feces, oral cavity and dental plaques of infected individuals. The disease is transmitted by ingestion of the pathogen.

3. What clinical tests can one use to diagnose H. Pylori infection?

Detection of urease in gastric biopsies can aid in the diagnosis. Patients can be given radiolabeled urea and the detection of radiolabeled CO2 on exhalation can also assist in diagnosis.

4. Who is most susceptible to uncomplicated UTI? To complicated UTI?

Uncomplicated UTIs occur in otherwise healthy people. They are usually (80%) caused by E. coli. Complicated UTIs are found in people who have urinary catheters, are immunosuppressed, or have an anatomical or functional defect that interferes with the normal voiding of urine.

5. What role does the urease produced by P. Mirabilis play in urinary tract disease? How might lateral flagella enable P. mirabilis to establish pyelonephritis?

The urease produced by P. Mirabilis can lead to the formation of kidney stones and subsequent blockage of the urinary tract. The lateral flagella allow the organism to swim upstream in the urinary tract and hold on oncce they reach their site of colonization.

6. How are UTI diagnosed in the lab? What is the importance of a "clean catch" specimen?

Urine specimens are collected after the stream of urine has begun, and are then cultured. If bacteria are isolated, a UTI is suspected. Presence of multiple organisms may imply contamination.

7. Which members of the Enterobacteriaceae are common contaminants of parenteral fluid?

Shigella, ETEC, EIEC, EHEC, Vibrio cholerae, and Campylobacter jejuni are all potential contaminants of parenteral fluids.

8. What is bacteremia? Sepsis? endotoxic shock?

Bacteremia is defined as the presence of viable bacteria in the bloodstream. Sepsis is defined as the presence of bacteria or toxic bacterial metabolites in the bloodstream or tissues. Endotoxic shock is the systemic reaction to an overwhelming presence of bacterial toxins in the bloodstream.

9. What are the lab characteristics of Psuedomonas aeruginosa? Where is it found in nature? How is it transmitted?

Psuedomonas aeruginosa are aerobic, gram (-) rods that are oxidase (+). They oxidize but do not ferment glucose and posssess polar flagellum. The ar found ubiquitous in nature and are transmitted in fluid media. They cause opportunisitic infections in patients with compromised inate immunity (surgical wounds, trauma, eye injury, IV catheters, patients with sepsis).

10. How might the polysaccharide capsule of K. pneumoniae assist in establishing infection? What is responsible for the mucoid appearance of Psuedomonas aeruginosa isolates in CF patients?

The polysaccharide capsule of K. pneumoniae assists the organism in establishing infections by inhibiting the actions of host immune responses and antimicrobial agents. The mucoid appearance in CF patient is due to the production of and alginate capsule that is very "sticky."

11. What is the mechanism of action of Psuedomonas aeruginosa exotoxin A?

Psuedomonas aeruginosa exotoxin A is a potent inhibitor of mammalian protein synthesis. Its mechanism is identical to diptheria toxin, in that it ADP-ribosylates EF-2 and prevent protein synthesis.

Anaerobes

1. Compare and contrast the mode of action of botulinus toxin and tetanospasmin.

Botulinum toxin interferes with the release of acetylcholine at the neuromuscular junction by cleaving components of the neurosecretory apparatus ® flaccid paralysis.

Tetanus toxin (tetanospasmin) cleaves vAMP and prevents the release of glycine from inhibitory interneurons in the spinal cord ® spastic paralysis.

2. What is infant botulism? What are the proposed mechanisms of pathogenesis?

Infant botulism occurs when the infant’s gut is colonized by C. botulinum that produces toxin in vivo. This leads to generalized hypotonia ® "floppy baby" syndrome.

3. Which of the organisms discussed are gram positive, spore forming anaerobes? Gram negative anaerobes? Gram positive anaerobes?

The clostridia species are gram-pos spore forming rods. Bacteroides species are gram-neg obligate anaerobic bacillus. Bacillus anthracis is an aerobic, gram positive rod.

4. What are the primary virulence determinants of B. Anthracis?

Virulent strains of Bacillus anthracis produce an anti-phagocytic poly D-glutamic acid capsule that increases its ability to survive in the host. They also produce three separate proteins (EF, LF, and PA) that combine to form a toxin. Edema factor (EF) is a calmodulin dependent bacterial adenylate cyclase. Lethal factor (LF) has no known enzymatic activity. Protective antigen (PA) is a tissue binding component required for significant disease in the infected host.

5. How is tetanus prevented? How is botulism prevented?

Vaccination with tetanus toxoid causes the host to produce protective antibodies for the disease. Botulism is prevented by using a trivalent antitixon vaccine and by proper food handling and preparation techniques.

6. How does C. perfringens alpha toxin work?

C. perfringens alpha toxin is a lecithinase that causes hemolysis of the RBC in circulation, destroys platelets and causes widespread damage.

7. Discuss the pathogenesis of botulism, pseudomembranous colitis and C. perfringens food poisoning.

Botulism, pseudomembranous colitis and C. perfringens food poisoning are all similar in that they involve ingestion of vegatative cells or spores. The cells or spores undre anaerobic conditions in the gut mature to produce an enterotoxin that has either systemic or local effects.

8. What is the most common bacterial species in the human gut?

Bacteroides spp.

9. What is the "preeminent" anaerobic pathogen in humans?

Bacteroides fragilis is the preeminent anaerobic pathogen in humans. This is based on virulence, ubiquity in various sites, and resistance to antimicrobials. It causes abcesses and tissue destruction on a regular basis.

Staphylococci

1. Which species of Staphylococci are medically relevant to human disease?

S. Aureus, S. epidermidis and S. saprophyticus are medically relavant to humans.

2. How are S. Aureus infections acquired? What are some of the risk groups for S. aureus invasive disease?

Most infections of staphylococci occur from autoinfection of strains that reside on the skin and mucous membranes (nose, perineum and urinary tract). Patients whose innate immunity has been compromised are at increased risk for developing invasive S. aureus infection. Patients who are diabetic, elderly, alcoholic, abuse IV drugs, have cystic fibrosis and those with indwelling catheters are at increased risk. Surgical patients and others who have open wounds are also at increased risk.

3. Describe the toxins produced by S. aureus. What other virulence factors are important in S. aureus disease?

I. Toxins
-Heat stable enterotoxin------------------->food poisoning
-Exfoliatin---------------------------------->scalded skin syndrome
-TSST-1----------------------------------->Toxic shock syndrome
-Alpha hemolysin (a -toxin)------------->RBC lysis

II. Extracellular products
-Coagulase--------------->causes clot that walls off bacteria from bloodstream
-Leukocidin------------->permeabilizes and kills PMNs and macrophages
-Hyaluronidase--------->hydrolizes host extracellular matrix and allows organism to move

III. Surface components
-Peptidoglycan layer---------------->septic shock
-Ribitol-techoic acid---------------->antigenic and binds fibronectin
-Protein A--------------------------->binds Fc portion of IgG --->antiphagocytic activity
-Clumping factor------------------->fibrinogen binding receptor
-Cell surface bound coagulase---->causes bacteria to be coated with fibrin and ¯ phagocytosis

4. How does one distinguish Staph species from Strep species in the lab?

The catalase test distinguishes Staph species from Strep species in the lab by testing the ability (inherent enzymatic machinery) of the bacteria to catalyze the reaction H2O2®H2O + O2. The enzyme required is "catalase." Staph species are catalse (+) and strep species are catalase (-).

5. What are some epidemiological tools used to study Staph epidemics?

Bacteriophage typing is based on the fact that staph species are lysogenic and carry phages to which they are immune but that are lytic for other species. Plasmid profiles allow one to characterize genetic info carried on plasmids (antibiotic resistance, etc). DNA fingerprinting can also be used to characterize the genetic info in a given strain and compare it to other strains.

6. How do Staph acquire antibiotic resistance? What is signified by MRSA? What are the public health implication of vancomycin resistant S. aureus isolates?

Penicillin resistance (and sometimes erythromycin) is due to a b -lactamase that is coded on a staph plasmid. Other low molecular weight plasmids encode resistance to tetracycline, chloramphenicol and kanamycin. Methycillin resistant staph aureus (MRSA) resistance to antibiotics is coded for in the bacterial chromosome. Emerging vancomycin resistance is probably due to genetic transfer from Enterococcus species.

7. What type of infection do S. epidermis and S. saprophyticus cause? How does one distinguish these species from S. aureus in the lab?

S. epidermis causes nosocomial infections in patients with indwelling catheters and prosthetic devices. S. saprophyticus is responsible for 10-20% of primary UTI in females. S. epidermis and S. saprophyticus are coagulase (-) and can therefore be distinguished from coagulase (+) S. Aureus in the lab.


Streptococci

1. What are the major virulence determinants for Strep pneumoniae? Strep pyogenes? What immune mechanisms protect the host against these organisms?

The most important virulence factors for Strep pneumoniae are the capsular polysaccharides. They are antigenic, anti-phagocytic, and a loss of the capsule leads to a loss of virulence. Strep pneumoniae also produce pneumolysin that injures pulmonary endothelial cells.

The most important virulence factor for Strep pyogenes is the production of M protein. It binds to the host epidermis and is anti-phagocytic. The capsule of this organism also contains hyaluronic acid that prevents the host from attacking it (would lead to autoimmune response to host tissue).

Humoral immunity (opsonization, phagocytosis, and development of an antibody titer) are the most important factors in protection for the host.

2. What are the primary disease caused by Strep pyogenes? Strep pneumoniae? Strep agalactiae? Group D streptococci? Viridans (a -hemolytic) strep?

Strep pyogenes (group A)----------------------->impetigo, wound infections, pharynigitis, cellulitis, necrotizing fascitis, myositis, rhuematic fever
Strep pneumoniae-------------------------------->pneumonia
Strep agalactiae (group B)--------------------->neonatal meningitis
Group D streptococci--------------------------->UTI, bacteremia (post urologic surg), endocarditis,
wound infection
Viridans (a -hemolytic) strep------------------->endocarditis, dental caries

3. What are the morphologic and physiological characteristics of all streptococci? In the clinical lab, how would you distinguish Strep pneumoniae from viridans (a -hemolytic) strep?

All streptococci species are gram (+) spheres that grow in pairs or chains. They are non-motile and are catalase (-).
In the clinical lab one could distinguish Strep pneumoniae from viridans (a -hemolytic) strep based on the fact that Strep pneumoniae is optochin sensitive and viridans strep is not. Furthermore, viridans will not grow in 6.5% NaCl/bile esculin.

4. Why is it clinically important to distinguish the enterococci from other group D streptococci?

Enterococci share many characteristics with other group D streptococci and are normal flora on the skin and in the GI tract. Enterococci that move to other sites in the body often cause disease (UTI, bacteremia, endocarditis, wound infection) and may exhibit strong antibiotic resistance. The other group D streptococci are normally non-virulent and display very little antimicrobial resistance.

5. Describe the extracellular and cell-associated products of Streptococcus pyogenes. How are these products used in the diagnosis of group A strep infections?

One can purchase commercially antibodies to group A strep that are linked to a staph species via protein A. When this combination is added to a group A strep sample, agglutination occurs. This confirms the presence of the group A strep.
Group A strep also render a (+) PYR (pyrrolidonyl arylamidase) test.


Neisseria I

1. What are the major virulence determinants of meningococci? What are the primary host defense mechanisms against these organisms?

The meningococci are obligate extracellular parasites. They cannot survive inside PMNs. The meningococcal capsule is antiphagocytic and is the major virulence determinant.
The host defense mechanism against meningococci is primarily a humoral response.

2. How would you isolate and identify N. meningitidis in the clinical lab? How would you distinguish it from normal flora neisseria?

Neisseria in general are gram (-) cocci that occur in pairs. They are non-motile and are non-spore forming. Pathogenic species will not grow at 220 C or on a growth agar without blood. They do require 5-10% CO2 for optimal growth. Non-pathogenic species grow well at 220 C or on a growth agar without blood. They do not require 5-10% CO2 for optimal growth.

3. What are the most common causes of bacterial meningitis by age in the US?

Age #1 #2 #3 #4 #5
<1 month group B strep listeria monocyt strep pneum
1-23 months strep pneum neisseria menin group B strep haemophilus flu
2-18 yrs neisseria menin strep pneum haemophilus flu group B strep listeria monocyt
19-59 yrs strep pneum neisseria menin haemophilus flu listeria monocyt group B strep
>60 yrs strep pneum listeria monocyt neisseria menin haemophilus flu group B strep

4. Compare and contrast the meningococcal vaccines with the pnuemococcal vaccines (Who gets them? How effective are they? etc).

The meningococcal vaccine is available with A, C, Y and W-135 capsular polysaccharides. It is not a good immunogen for children >2 yrs of age. There is no group B vaccine as yet because the capsular polysaccharide is a poor immunogen even for adults.
The pneumococcal vaccine contains polysaccharide from each of the 23 serotypes. It is also better for patients that are >2 yrs of age. It is highly recommended for people at hi risk® elderly , immune deficiency, chronic disease patients, sickle cell anemia, splenectomized, alcoholics.

Neisseria II

1. How does uncomplicated gonorrhea usually manifest in a male? In a female of reproductive age? In a pre-adolescent female?

Uncomplicated gonorrhea in a male is characterized by urethritis. The patient will present with frequent, urgent and painful urination. A yellow, mucopurulent discharge containing neutrophils and gram (-) diplococci is seen. The incubation period is 2-7 days after contact with an infected partner.

Uncomplicated gonorrhea in a female of reproductive age is characterized by cervicitis. This is an inflammation of the endocervical canal epithelium. A mucopurulent discharge is often seen. Bartholin’s glands can also become infected and develop into an abcess.

Uncomplicated gonorrhea in a pre-adolescent female is characterized by vulvovaginitis.

2. What are the clinical manifestations of ascended reproductive tract infection in males and in females? What post-infection complications might result?

Ascended reproductive tract infection in males can lead to epididymitis and prostitis. Endometritis, salpingitis and pelvic inflammatory disease are common in females with an ascended infection. These infections all can lead to sterility if severe and/or untreated. They can also lead to ectopic pregnancy in women.

3. What other organisms cause acute urethritis in men and urethritis / cervicitis in women? How would you differentially diagnose these agents?

Chlamydia trachomatis, ureaplasma urealyticum, trichomonas vaginalis and Herpes Simplex Virus all cause urethritis in men and women. The diagnosis of the causative agent in a given case is based on a gram-stain of a sample taken from the patient. One should attempt to grow pathogens on culture, conduct antibody titer count and examine genomic information in order to form a definitive diagnosis.

4. How would you isolate and identify N. gonorrhea in the clinical laboratory? How would you distinguish it from N.meningitidis?

First, one obtains a specimen from the patient. This can be done by swabbing the infected site (urethra, cervix, anus, etc.). Organisms are then cultured and classified. N. gonorrhea are gram (-) diplococci, oxidase (+) and nonmotile.
N. meningitidis is also gram (-) and grows on maltose. N. gonorrhea grows on glucose but not maltose.

5. Discuss the evolution and mechanisms of gonococcal resistance to penicillin. What other antimicrobial agents are used to treat gonorrhea? Has resistance developed to these agents? What are the mechanisms of gonococcal resistance to these agents?

Gonococcal resistance to penicillin is carried on a small plasmid. This genetic information for production of a penicillinase was probably acquired from H. ducreyi. Resistance can also occur in the form of altered penicillin binding proteins that are chromosomally encoded.
Tetracycline is also used to treat gonococcal infection, but genetic information can transfer such that the penicillin resistance also affects sensitivity to tetracycline. This leads to a double resistant organism.
Fluoroquinolone treatment is effective, but resistance is developing due to an altered DNA gyrase.

6. Which surface components of the gonococcus undergo phase and antigenic variation?

The pili, opacity proteins, and the lipooligosaccharides undergo phase and antigenic variation.

7. What are the epidemiological implications of phase and antigenic variation of the gonococcal pili?

Because the outer pili of the gonococcal species are highly variable, it is very difficult to design a vaccine that can target a conserved structure. N. gonorrhea do not possess a capsule and this also increases the difficulty in developing a vaccine.

Mycobacterial infections

1. How is the cell mediated immune (CMI) response involved in mycobacterial infection?

A host infected with mycobacteria fights the organism through activated macrophages that kills the infectious agent. CD4+ T-cells secrete lymphokines that activate the macrophages. CD8+ T-cells release bacilli from unactivated phagocytes and allow the organisms to be ingested by activated macrophages. Patients who have AIDS are at increased risk of developing mycobacterium tuberculosis infection because they are CD4+ deficient and cannot fight off the pathogen.

2. What characteristics of tuberculosis and leprosy are important when considering the epidemiology of these diseases?

Tuberculosis is a significant disease in the grand scheme. Worldwide, there are 5-8 million new cases per year and 2-3 million deaths. The concentration of TB is increased in areas of poverty, overcrowding and generally poor living conditions. TB is developing significant resistance to antibiotic therapy. Less than 10 viable bacilli in the airway of a susceptable host can cause disease. Because TB declined continuously for several years, public awareness of the disease waned. As TB reemerges as a resistant infectious agent, large scale epidemics could occur.
There are 12 million cases of leprosy worldwide. Unlike TB, a large dose of bacilli is required to cause infection in a susceptable host. Leprosy is sensitive to dapsone, but resistant strains are present.

3. Compare and contrast the two polar forms of leprosy.

Tuberculoid leprosy elicits a highly specific CMI response. Bacilli in this form of the disease growin the skin, but they also invade Schwann cell and macrophages that can lead to peripheral neuropathy.The host is able to kill (CD4+ T-cells) the bacilli and granulomas form around sites of dermal infection.

Patients who develop lepromatous leprosy are deficient in cell mediated immunity. Growth of the pathogen proceeds relatively unimpeded (unless the patient is treated with medication) and is spread via the host’s lymphatic system. Skin lesions are extensive, symmetrical, and diffuse. The face, lips, forehead, ears and nose are the most common sites of infectious lesions. Damage from this form of the disease is often disfiguring and irreversible.

Corynebacteria and listeria

1. How would you process a clinical specimen to identify C. diptheria? What properties distinguish it from Staph Aureus and from Strep pneumoniae?

C. diptheria produces grey to black colonies on selective medium that contains tellurite. It is an aerobic, gram (+) rod that is not spore forming and is catalase (+). Staph aureus and Strep pneumoniae are gram (+) cocci. Staph aureus is catalase (+) and Strep pneumoniae is catalase (-).

2. How do the properties of the A and B domains of diptheria toxin contribute to its mode of action in intoxicating susceptible human cells?

Diptheria toxin is secreted as a single polypeptide that is proccessed by proteolysis into two subunits. Fragment B binds to receptors on the plasma membrane of susceptible cells and initiates uptake of the toxin by receptor mediated endocytosis. Fragment A is transported to the cytosol where it ADP-ribosylates EF2 and inhibits protein synthesis by the infected cell. This reaction is virtually identical to the pathogenic toxin of psuedomonas aeruginosa but the two toxins recognize different receptors.

3. What are the roles of antitoxic antibodies in treatment and prevention of diptheria?

Antitoxic antibodies neutralize the toxicity of diptheria toxin. Usually, a person who is suspected or confirmed to have a case of diptheria is given horse antitoxin. One can also be vaccinated against diptheria and prevent infection by the use of the diphteria toxoid immunization that is available.

4. What environmental and host factors predispose to infection by Listeria monocytogenes? How would you distinguish Listeria monocytogenes in a cultured clinical specimen from Streptococcus penumoniae or from Corynebacterium diptheria?

Persons who are HIV (+) and/or are immunosuppresed are at increased risk of infection from Listeria. Most infections in humans are food borne, but infection of a pregnant woman can lead to abortion, stillbirth, and transplacental infection of the infant.

Listeria monocytogenes is a short, gram (+) rod that is non-sporulating, aerobic to microaerophilic and is catalase (+). Strep pneumoniae is a gram (+) cocci that is catalase (-). Corynebacterium diptheria produces grey to black colonies on selective medium that contains tellurite. It is an aerobic, gram (+) rod that is not spore forming and is catalase (+).

Haemophilus, Moraxella and Bordetella

1. What are the primary virulence determinants of Haemophilus influenzae? Bordetella pertussis? What immune mechanisms are important in defense against these organisms?

The primary virulence determinant of Haemophilus influenzae is a capsular polysaccharide that is antiphagocytic. Non-encapsulated forms are normal flora of the URT that can cause some diseases (otitis media, sinusitis, conjunctivitis, etc).
The primary virulence determinants of Bordetella pertussis are toxins. The primary toxin activates the mebrane adenylate cyclaase of eukaryotic cells via ADP-ribosylation of regulatory protein G1. This leads to an increase in cAMP and increased fluid secretion in the URT. Bordetella pertussis also produces adhesive factors and a tracheal cytotoxin.
Anti-capsular antibodies (humoral immunity) against Haemophilus influenzae are protective. They coat the pathogen and mediate complemtn dependent phagocytosis / lysis.
Protection against Bordetella pertussis is somewhat elusive. Antibodies are produced during active infection with the disease and from immunization. Naturally acquired immunity is not lifelong, second attacks are common. Newborns and infants that are not immunized are highly susceptible, reflecting a low level of antibody being passed from the adult mother to the newborn child.

2. What are the in vitro growth requirements for H. influenzae? How do these compare with H. ducreyi? B. pertussis?

Haemophilus influenze requires X (hemin, heat stable) or V (can be replaced by NAD / NADP, heat labile). These factors are provided by chocolate agar. The organism grows best in 5-10% CO2.
Heamophilus ducreyi also grows best on enriched chocolate agar in 10% CO2 and at 350 C.
Bordatella pertussis requires enriched media that binds fatty acids. Bordet-Gengou agar (contains potato extract, 30% blood and glycerol) is ideal.

3. What is the chemical composition of the type b capsule? How does this compare with the capsule of S. pneumoniae? B. anthracis? E. coli K-1?

The Haemophilus influenzae type b capsule is composed of polyribose-ribitol phosphate (PRP).
The capsule of S. pneumoniae is composed of a very diverse group of polysaccharides, choline, acetyl, and phosphate groups. Over 80 different combinations have been classified.
The capsule of Bacillus anthracis is D-glutamic acid polypeptide.
E. coli K-1 species produce a capsular polysaccharide that contains sialic acid and is structurally identical to the group B polysaccharide of Neisseria meningitidis.

4. What are the similarities and differences in mode of action of cholera toxin, diptheria toxin, and pertussis toxin?

Cholera toxin, diptheria toxin and pertussis toxin are all ADP-ribosylases. Their most significant difference is their target. Cholera toxin affects the stimulatory G protein (GS)of the adenylate cyclase complex. Pertussis toxin attacks the inhibitory protein (GI) of the same complex. Diptheria toxin affects elongation factor 2 (EF2) that leads to a blockage of host cell protein synthesis.

5. Compare the vaccines against pertussis and H. influenzae type b with regard to composition and efficacy.

The current pertussis vaccine is composed of a mixture of purified, inactivated B. pertussis products. It is very effective in producing immunity to the disease and has only local side effects.
The H. influenzae type b (Hib) vaccine is a conjugation of Hib with diptheria toxoid. It is highly effective and serves as a model for the development of future vaccines.

6. How does B. pertussis colonize the respiratory tract? Is it an invasive organism? How does the
pathogenesis of pertussis compare with that of diptheria? Cholera?

B. pertussis colonizes the ciliated bronchial epithelium without invading the tissue. It does this via filamentous attachment. The bacteria first attach to and immobilize the cilia. The ciliated epithelial cells are then slowly destroyed by bacterial toxins.
The diseases caused by infection with Vibrio cholera and corynebacteria diptheriae are due to the production of ADP-robosylating toxins by the organism that lead to altered host cell function.

Mycoplasma and legionella infections

1. How do mycoplasms differ from other bacteria? What characteristics do they have in common? How do these organisms appear under a microscope?

Mycoplasm do not have a cell wall. They are much smaller than other bacteria, and contain DNA genomes. Under a microscope, mycoplasm stain poorly or not at all and because of their small size, they are difficult to see.

2. What are the major disease syndromes caused by mycoplasma? What pathogenic mechanisms are involved?

Mycoplasma pneumonia causes primary atypical pneumonia (walking pneumonia). Mycoplasma hominis causes genital infections. Many other clinical syndromes (wheezing, pharyngitis, rhinitis, erythema multiforme, myringitis, otitis media, et al) are associated with mycoplasma infection.
Mycoplasma enter the respiratory tract via inhalation and attach to cells in the lower part of the tract. The pathogens remain extracellular and intefere with ciliary action. The immune response to infection may lead to an autoimmune attack on the host in some cases.

3. What are the most common clinical signs of infection with M. pnuemoniae?

One sees non-specific pulmonary infiltrates, fever, malaise, myalgia, sore throat, and cough (nonproductive, productive, or paroxysmal).

4. Why do you think that Legionella pneumoniae was not discovered until the mid 1970’s? What are its characteristic properties?

Legionella pneumoniae is a motile, gram (-) rod that is difficult to stain. It is very difficult to culture due to restrictive growth criteria (requires cysteine and iron). Because it is very small (.5-.7mm wide and 2-20mm long) and difficult to stain, isolation and identification is very difficult.

5. What are some ecological niches for L. pneumoniae? How is it transmitted?

Legionella pneumoniae hides in air conditioning equipment that uses water internally (cooling towers and condensers). Shower heads, faucet taps, and vegetable misters can also harbor the organism.
The pathogen is transmitted by inhalation of the aerosolized bacteria. It is not easily (if at all) spread from person to person.

6. How is legionellosis diagnosed in the lab?

Demonstration in culture of the bacteria taken from tissue or secretions is useful for diagnosis. Bacteria can be demonstrated in tissue by using a silver impregnation technique that highlights the intracellular pathogen. Direct immunofluorescence can detect the organism in pleural fluid or lung tissue. A 4-fold rise in the antibody titer of a suspected patient is strong evidence for infection.

Chlamydial infections

1. Why are chlamydial infections often misdiagnosed?

Chlamydial infection can range from a chronic / persistent infection to acute infection, or totally inapparent to the host. The symptoms of chlamydial infection are common to many other STDs. Microscopic examination of specimens in an attempt to identify the organism is very difficult because of the size of the pathogen. Growing these organisms in culture is very difficult. The diagnosis of chlamydia is usually made when a patient presents with symptoms of STD and no gonococci can be demonstrated in a specimen. Many times, an infection with gonococci masks an infection with chlamydia.

2. Why are chlamydial infections often inappropriately treated?

Because chlamydia is difficult to diagnose, treatment for the patient’s symptoms can be ineffective against the pathogen. If one treats for a gonococci infection without including antimicrobials against chlamydia, the infection may not be cleared by the host.

3. How would you interrupt the cycle of transmission of trachoma? Nongonococcal urethritis? Psittacosis? Lymphogranuloma venereum?

4. How do reticulate bodies (Rbs) differ from elementary bodies (Ebs)?

EB RB
Morphology small and dense large, homogenous
Size .25 mm .6-1.0 mm
Stage extracellular/infectious intracellular/replicative
Osmotic fragility --- +++
Metabolic activity --- +++
Outer membrane cross-linked not cross-linked

5. What antibiotics are most effective in treating chlamydial infections? Why?

Doxycycline (tetracycline) is the anitbiotic of choice. Chlamydia do not possess a peptidoglycan layer in their cell membrane. Therefore, antibiotics directed toward cell wall synthesis are ineffective. Chlamydia is an intracellular pathogen and tetracycline is effective against it because the drug is very hydrophobic. This decreases its ability to enter and attack host cells. However, once inside the host cell the drug is actively taken up by the pathogen whose ribosomes are very sensitive to its action.


Spirochetes

1. What features do all spirochetes have in common? What features distinguish the genera Treponema, Borrelia and Leptospira?

Spirochetes are spiral shaped organisms that don’t gram stain. They are also very difficult to culture in vitro. The periodicity of the coil and the overall size of the organism varies among the genera and species in the spirochete family. Spirochetes are prokaryotes with inner and outer membranes. They also display corkscrew motility.
Treponema are 5 to 15 mm in length with regular spirals 1mm in length and an amplitude of .3 mm.
Borellia is a large spirochete 10 to 30m m long and .3 m m wide. It contains 15 to 20 axial flagella. The spirals are irregular with a 2 to 4 m m wavelength.
Leptospira is a slim (.15m m) spirochete 5-15 m m long. It displays a single axial filament, fine closely wound sprials, and hooked ends.

2. What are the clinical stages of syphillis? Where are the organisms located during each stage? What are the host responses to infection at each stage? How is the diagnosis of syphillis established by lab tests?

10 syphillis presents with a hard, painless genital chancre that is teeming with infective organisms. Patients in this phase are at increased risk of spreading HIV. Lymphocytes, monocytes and plasma cells surround the lesion. The chancre heals spontaneously but systemic infection remains.

20 syphillis presents with papulosquamous rashes on the soles, palms, and mucous mebranes. Painless, mucosal warty lesions in the perineal and genital area, known as condyloma lata, is seen in this stage. Regional adenopathy and tenderness may be present. Latent syphillis is an asymptomatic infection (carrier).

30 syphillis appears as early as 5 years, and as late as 20 years, after the initial infection. Patients present with syphilitic aortitis, CNS effects, and gummas (granulomatous lesions in any organ of the body). These effects are most likely due to a DTH response to the spirochete or autoimmunity to host tissues infected with spirochetes.

Syphillis is diagnosed with non-treponemal and treponemal assays, direct demonstration of spirochetes from lesions, and detection of treponemal specific IgM antibody.

3. What are the risk factors for acquiring syphillis? Relapsing fever? Lyme disease? Leptospirosis? What is the significance of these diseases for civilian and military populations? What are the major clinical features of these diseases?

Persons who practice "unsafe" sex with multiple partners, use IV drugs, and are HIV (+) are at increased risk of contracting syphillis.

Persons who are exposed to wild animals (deer, ticks, fleas, etc) are at risk for developing lyme disease and relapsing fever.

Persons who wade in water that has bovine urine in it are at increased risk of developing leptospirosis.

These diseases do not have high mortality rates, but they do have high morbidity rates. Therefore, the prevention of these diseases through prophylaxis and behavior modification is of particular interest to the military, in order to conserve fighting strength.

Bacterial Vaginosis and Trichamonas Infections

1. Why is transmission of T. vaginalis infection difficult to control?

T. vaginalis is a very hardy organism. It can live outside of the human body for some time in a warm, moist environment. Many people who are infected with T. vaginalis are asymptomatic and spread the disease via sexual contact to their partners. If people have multiple partners, epidemics can develop before anyone is aware of the infection.

2. How do hydrogenosomes differ from mitochondria? What drugs are uniquely targeted to hydrogenosome enzymes?

Hydrogenosomes house the enzymatic machinery that can carry out anaerobic oxidation of pyruvate to acetate. This is coupled to ferredoxin mediated electron transport. Metronidazole targets the pyruvate::ferredoxin reductase enzyme used in this pathway.

3. What are the major virulence factors of T. vaginalis? What are the major host defenses against this parasite?

T. vaginalis produces adhesive proteins that help the organism adhere to the vaginal epithelium. The organism possesses a surface cysteine proteinase that is involved in both cytoadherance and cytotoxicity. The immunodominant surface glycoprotein undergoes phenotypic variation by harboring an RNA virus in its cytoplasm.

4. Why do bacterial vaginosis and trichamoniasis frequently occur together?

Bacterial vaginosis is an overgrowth of the normal vaginal flora that leads to a more alkaline pH and loss of H2O2. Several anaerobic species that are normal flora in the vagina proliferate and increase the production of succinate. This inhibits the chemotaxis of white blood cells. All of these conditions, when combined, favor establishment and proliferation of T. vaginalis.

5. Metronidazole is used to treat Giardia, Entamoeba histolytica, and Helicobacter pylori. What can you infer about the energy metabolism of these GI tract pathogens?

If metronidazole is effective against these organisms, they must share the enzymatic machinery described above for T. vaginalis. According to Lange’s Pharmacology (p. 828), Entameoba and Giardia do not possess a hydrogenosome, but they do use the same enzyme that metronidazole targets in T. vaginalis infections.

6. Why do bacterial vaginosis and vaginal
yeast infections frequently recur?

Because these diseases are overgrowths of the normal flora, the immune response to these infections is limited. Once an infection is cleared with medication, the only thing necessary for overgrowth (recurrence) to return is an imblance in the environmental conditions of the vagina.

Yersinia, Brucella and Francisella

1. How do Y. pestis, Brucella sp. and Francisella tularensis evade host defense mechanisms?

Y. pestis possesses a capsule that is antiphagocytic. All three organisms are facultative intracellular organisms that by living in macrophages, resist being killed by macrophages. Cell mediated immunity against the infected cells is required in order to end the infection without medical intervention.

2. What kind of vaccine would be optimal to protect an individual against infection with Y. pestis?

A vaccine that would increase cell mediated immunity against the capsular antigen of Y. pestis or the YOMPs would be effective.

3. What zoonotic infections have we discussed to date?

Disease Etiologic agent Reservoir
Anthrax Bacillus anthracis cattle, sheep, goats
Campylobacter infection C. jejuni wild mammals, cattle, sheep, pets
Leptospirosis Leptospira sp. cattle, rodents
Lyme disease Borellia burgdorferi deer, rodents
Plague Y. pestis rodents
Relapsing fever Borellia sp. rodents, ticks
Salmonellosis Salmonella sp. poultry, livestock
RMSF R. rickettsii rodents, ticks, mites
Murine typhus Rickettsia typhi rodents
Q fever Coxiella burnettii cattle, sheep, goats

4. Compare and contrast the in vitro growth requirements and characterisitics of Y. pestis, B. abortus, and F. tularensis.

Y. pestis is not considered fastidious and grow optimally at 280 C. Most virulence traits are expressed at 370 C (temperature inside human body).

Brucella abortus is a slow growing organism that is very fastidious and requires CO2 for growth.

F. tularensis can be grown in vitro if the culture medium contains cysteine.

5. Who is most likely to get bubonic plague? Pneumonic plague? Brucellosis? Infected with F. tularensis?

Bubonic plague results from being bitten by an infected flea that feeds on infected rodents or other small animals. Anyone who is exposed to infected fleas or rodents could contract the disease.

Pneumonic plague can be contracted by inhaling aerosolized secretions or droplets expelled from the respiratory tract of someone infected with Y. pestis.

Brucellosis is contracted by contact with infected animals. Veterinarians, slaughter house workers, and farmers are at risk for infection. Anyone who drinks raw milk from an infected animal could also contract the disease.

People who lead an active, outdoor lifestyle and come into contact with wild rabbits, muskrats, ticks or deerflies are at highest risk for developing tularemia.

Rickettsia

1. Compare and contrast chlamydia, E. coli, rickettsia, and mycoplasma.

Chlamydia are obligate intracellular parasites. They multiply by binary fision and have DNA, RNA and 70s ribosomes. They carry plasmids, and their cell envelope is similar to a gram (-) species, but they do not possess a peptido-glycan layer.
E. coli are gram (-) rods that live in the lower GI tract. They are able to ferment lactose.
Ricketssia are pleomorphic coccobacilli that can be visualized with Wright-Giemsa stain. They multiply by binary fission and require a supply of co-factors (NAD, ATP, CoA) from the host for survival.
Mycoplasma are the smallest free living organism. They do not have a cell wall, and are distinguished based on serotype. Some species are normal flora, while others are frank pathogens.

2. How are the rickettsia classified?

The rickettsia are classified based on clinical features, epidemiologic aspects, and immunologic characteristics.

3. What are the characteristic pathological features of most rickettsial diseases?

Vasculitis caused by the proliferation of the organism in the endothelial lining of small blood vessels. This leads to the clinical manifestations of infection that are commonly seen: rash, fever, headache, malaise, prostration, hepatosplenomegaly.

4. Which rickettsia are:
able to grow on cell-free media®Bartonella sp. very resistant to drying®Coxiella burnetii transmitted by mites®Orientia tsutsugamushi and Rickettsia akari
transmitted by ticks®Rickettsia rickettsii, Ehrlicia chaffeenis, Coxiella burnettii,
not transmitted by an arthropod vector®Rickettsia prowazekii, Rickettsia typhi, Rickettsia akari, Bartonella sp.

5. Compare and contrast the clinical manifestations of epidemic typhus and RMSF.
Epidemic typhus presents with a severe systemic infection and prostration. The fever may last for 2 weeks. A rash is noted that spreads from the axilla and trunk, outward to the extremities. The face, palms, and soles are spared from the rash.
RMSF presents with an acute, febrile illness with mylagia, malaise, and a rash. The rash of RMSF begins on the palms and soles and moves inward. The rash may involve the entire body.

6. How would you treat RMSF?

Tetracycline and / or chloramphenicol is the treatment of choice for RMSF.

7. What lab tests are used to confirm the diagnosis of rickettsial disease?

Skin biopsies may reveal the pathogenic organism by immunofluoresence. Serologic response to specific antigens can also be used to confirm the diagnosis.

8. What is the most common tick-borne infection in the US?

Rocky Mountain Spotted Fever
 

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